Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05216290_1296 | Not Available | Positive | 1457404 - 1458327 | 36166.4 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05216290_1297 | Not Available | Positive | 1458370 - 1459488 | 42249.5 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05216290_1298 | Not Available | Positive | 1459596 - 1461227 | 62267.2 |
| proline 4-hydroxylase (includes rps23 pro-64 3,4-dihydroxylase tpa1), contains sm-20 domain | SAMN05216290_1299 | Not Available | Positive | 1461220 - 1462077 | 33355.8 |
| hypothetical protein | SAMN05216290_1300 | Not Available | Negative | 1462048 - 1462719 | 25877.6 |
| release factor glutamine methyltransferase | SAMN05216290_1301 | Not Available | Negative | 1462709 - 1463407 | 26784.6 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05216290_1302 | Not Available | Negative | 1463394 - 1464806 | 54625.6 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05216290_1303 | Not Available | Negative | 1464808 - 1466322 | 58521.1 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05216290_1304 | Not Available | Negative | 1466403 - 1467554 | 44090.6 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN05216290_1305 | Not Available | Negative | 1467570 - 1468661 | 40749.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
