Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN05216290_1276 | Not Available | Negative | 1434766 - 1437171 | 90964.3 |
| transcriptional regulator, laci family | SAMN05216290_1277 | Not Available | Negative | 1437336 - 1438367 | 37631.1 |
| fructose-bisphosphate aldolase | SAMN05216290_1278 | Not Available | Positive | 1438788 - 1439852 | 39101.8 |
| 6-phosphofructokinase | SAMN05216290_1279 | Not Available | Negative | 1439921 - 1441030 | 40216.1 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05216290_1280 | Not Available | Negative | 1441096 - 1441665 | 20997.1 |
| na+/h+-dicarboxylate symporter | SAMN05216290_1281 | Not Available | Negative | 1441717 - 1443114 | 50542.8 |
| chorismate synthase | SAMN05216290_1282 | Not Available | Negative | 1443135 - 1444211 | 38782.9 |
| oxygen tolerance | SAMN05216290_1283 | Not Available | Negative | 1444212 - 1445672 | 54735.6 |
| hypothetical protein | SAMN05216290_1284 | Not Available | Positive | 1445821 - 1446006 | 7421.13 |
| epoxyqueuosine reductase | SAMN05216290_1285 | Not Available | Negative | 1446049 - 1446984 | 35549.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
