Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN05216290_1246 | Not Available | Positive | 1396247 - 1396756 | 19643.3 |
| iron complex outermembrane recepter protein | SAMN05216290_1247 | Not Available | Positive | 1396966 - 1399422 | 91551.7 |
| glucokinase | SAMN05216290_1248 | Not Available | Positive | 1399664 - 1400662 | 35897.2 |
| hypothetical protein | SAMN05216290_1249 | Not Available | Positive | 1400826 - 1401473 | 24891.9 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN05216290_1250 | Not Available | Negative | 1401544 - 1403250 | 65315.7 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN05216290_1251 | Not Available | Negative | 1403247 - 1404995 | 65826.7 |
| predicted transcriptional regulator | SAMN05216290_1252 | Not Available | Negative | 1404995 - 1405363 | 14234.2 |
| release factor glutamine methyltransferase | SAMN05216290_1253 | Not Available | Negative | 1405601 - 1406452 | 32091.4 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN05216290_1254 | Not Available | Positive | 1406454 - 1407626 | 43031.6 |
| gaf domain-containing protein | SAMN05216290_1255 | Not Available | Positive | 1407677 - 1408159 | 17550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
