Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05216290_1236 | Not Available | Positive | 1386098 - 1386589 | 17372.5 |
| xtp/ditp diphosphohydrolase | SAMN05216290_1237 | Not Available | Positive | 1386624 - 1387202 | 21474.2 |
| uridine kinase | SAMN05216290_1238 | Not Available | Positive | 1387279 - 1387893 | 23850.5 |
| hypothetical protein | SAMN05216290_1239 | Not Available | Positive | 1387942 - 1388310 | 13751.4 |
| secd/secf fusion protein | SAMN05216290_1240 | Not Available | Positive | 1388402 - 1391413 | 108603.0 |
| hnh endonuclease | SAMN05216290_1241 | Not Available | Positive | 1391594 - 1392226 | 24600.3 |
| imp dehydrogenase | SAMN05216290_1242 | Not Available | Negative | 1392327 - 1393796 | 52633.9 |
| selenocysteine lyase/cysteine desulfurase | SAMN05216290_1243 | Not Available | Negative | 1393880 - 1395040 | 42897.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN05216290_1244 | Not Available | Negative | 1395042 - 1395569 | 20446.9 |
| nicotinamide mononucleotide transporter | SAMN05216290_1245 | Not Available | Positive | 1395621 - 1396250 | 24236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
