Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase | SAMN05216290_1226 | Not Available | Positive | 1374216 - 1375658 | 52185.7 |
| putative abc transport system permease protein | SAMN05216290_1227 | Not Available | Positive | 1376110 - 1378515 | 89811.6 |
| thioredoxin | SAMN05216290_1228 | Not Available | Positive | 1378580 - 1378879 | 11005.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216290_1229 | Not Available | Negative | 1378881 - 1379651 | 28825.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05216290_1230 | Not Available | Negative | 1379638 - 1381572 | 71040.5 |
| condensin subunit scpa | SAMN05216290_1231 | Not Available | Positive | 1381722 - 1382480 | 29618.1 |
| hypothetical protein | SAMN05216290_1232 | Not Available | Positive | 1382482 - 1383513 | 38722.4 |
| nucleoside diphosphate kinase | SAMN05216290_1233 | Not Available | Negative | 1383571 - 1383990 | 15168.0 |
| phosphoesterase recj domain-containing protein | SAMN05216290_1234 | Not Available | Positive | 1384185 - 1385204 | 37767.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05216290_1235 | Not Available | Positive | 1385201 - 1386097 | 33058.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
