Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216290_1196 | Not Available | Positive | 1341202 - 1342149 | 36599.3 |
| hypothetical protein | SAMN05216290_1197 | Not Available | Positive | 1342139 - 1342714 | 22390.6 |
| hypothetical protein | SAMN05216290_1198 | Not Available | Positive | 1342838 - 1343446 | 23782.5 |
| dihydrofolate reductase | SAMN05216290_1199 | Not Available | Positive | 1343443 - 1343979 | 19789.7 |
| trehalase | SAMN05216290_1200 | Not Available | Positive | 1344081 - 1345424 | 52522.0 |
| hypothetical protein | SAMN05216290_1201 | Not Available | Negative | 1345481 - 1346956 | 57993.3 |
| glycerate kinase | SAMN05216290_1202 | Not Available | Positive | 1347004 - 1348101 | 38816.5 |
| alanine dehydrogenase | SAMN05216290_1203 | Not Available | Positive | 1348139 - 1349344 | 45006.6 |
| deoxyribose-phosphate aldolase | SAMN05216290_1204 | Not Available | Positive | 1349334 - 1349993 | 23705.7 |
| acylphosphatase | SAMN05216290_1205 | Not Available | Positive | 1349980 - 1350249 | 10160.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
