Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1146 | Not Available | Positive | 1291299 - 1292186 | 32694.2 |
| abc-2 type transport system atp-binding protein | SAMN05216290_1147 | Not Available | Positive | 1292334 - 1293242 | 33638.8 |
| abc-2 type transport system permease protein | SAMN05216290_1148 | Not Available | Positive | 1293239 - 1294567 | 48789.2 |
| l-histidine carboxy-lyase (histamine-forming) | SAMN05216290_1149 | Not Available | Positive | 1294886 - 1296127 | 46965.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05216290_1150 | Not Available | Positive | 1296189 - 1297409 | 45344.9 |
| atp synthase f1 subcomplex beta subunit | SAMN05216290_1151 | Not Available | Positive | 1297526 - 1299034 | 54233.8 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05216290_1152 | Not Available | Positive | 1299045 - 1299293 | 8668.51 |
| pkhd-type hydroxylase | SAMN05216290_1153 | Not Available | Positive | 1299802 - 1300392 | 22574.6 |
| hypothetical protein | SAMN05216290_1154 | Not Available | Positive | 1300568 - 1301755 | 42549.1 |
| hypothetical protein | SAMN05216290_1155 | Not Available | Negative | 1301846 - 1302541 | 25783.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
