Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216290_1086 | Not Available | Positive | 1229887 - 1233027 | 114036.0 |
| starch-binding associating with outer membrane | SAMN05216290_1087 | Not Available | Positive | 1233027 - 1234451 | 52102.5 |
| hypothetical protein | SAMN05216290_1088 | Not Available | Negative | 1234521 - 1235201 | 25889.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216290_1089 | Not Available | Positive | 1235746 - 1238940 | 115013.0 |
| susd and ragb outer membrane lipoprotein | SAMN05216290_1090 | Not Available | Positive | 1238969 - 1240693 | 63601.5 |
| hypothetical protein | SAMN05216290_1091 | Not Available | Positive | 1240715 - 1241641 | 33056.0 |
| tetratricopeptide repeat-containing protein | SAMN05216290_1092 | Not Available | Negative | 1241718 - 1242740 | 38689.2 |
| amidohydrolase family protein | SAMN05216290_1093 | Not Available | Negative | 1242742 - 1244325 | 59758.1 |
| hypothetical protein | SAMN05216290_1094 | Not Available | Negative | 1244397 - 1244771 | 13624.4 |
| putative abc transport system permease protein | SAMN05216290_1095 | Not Available | Negative | 1244874 - 1247423 | 94779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
