Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1076 | Not Available | Positive | 1215934 - 1216194 | 9870.51 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05216290_1077 | Not Available | Negative | 1216375 - 1218177 | 67529.1 |
| hypothetical protein | SAMN05216290_1078 | Not Available | Negative | 1218174 - 1219301 | 43908.7 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05216290_1079 | Not Available | Negative | 1219294 - 1219800 | 18671.2 |
| sortilin, neurotensin receptor 3 | SAMN05216290_1080 | Not Available | Positive | 1219940 - 1223056 | 115714.0 |
| dna-binding transcriptional regulator, marr family | SAMN05216290_1081 | Not Available | Positive | 1223060 - 1223527 | 17647.3 |
| hypothetical protein | SAMN05216290_1082 | Not Available | Positive | 1223593 - 1223763 | 6587.82 |
| n-terminal domain of peptidase_s41 | SAMN05216290_1083 | Not Available | Positive | 1223984 - 1224907 | 34155.5 |
| putative abc transport system permease protein | SAMN05216290_1084 | Not Available | Positive | 1224985 - 1227366 | 88524.3 |
| carboxyl-terminal processing protease | SAMN05216290_1085 | Not Available | Positive | 1227533 - 1229581 | 77091.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
