Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05216290_1066 | Not Available | Negative | 1199583 - 1200725 | 42550.2 |
| beta-glucosidase | SAMN05216290_1067 | Not Available | Negative | 1200769 - 1203687 | 110221.0 |
| hypothetical protein | SAMN05216290_1068 | Not Available | Positive | 1203766 - 1204122 | 13922.5 |
| dna mismatch repair protein mutl | SAMN05216290_1069 | Not Available | Positive | 1204137 - 1206002 | 69490.0 |
| rhomboid family protein | SAMN05216290_1070 | Not Available | Positive | 1206008 - 1206805 | 30144.0 |
| membrane associated serine protease, rhomboid family | SAMN05216290_1071 | Not Available | Positive | 1206809 - 1207741 | 34355.2 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05216290_1072 | Not Available | Negative | 1207762 - 1208811 | 39945.2 |
| carboxypepd_reg-like domain-containing protein | SAMN05216290_1073 | Not Available | Negative | 1208893 - 1212354 | 132388.0 |
| acyl-coa thioesterase fadm | SAMN05216290_1074 | Not Available | Negative | 1212470 - 1212889 | 15945.4 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216290_1075 | Not Available | Positive | 1213046 - 1215661 | 98041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
