Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN05216290_1026 | Not Available | Positive | 1161776 - 1162810 | 39309.5 |
| hypothetical protein | SAMN05216290_1027 | Not Available | Positive | 1162991 - 1163251 | 10269.8 |
| protein-tyrosine-phosphatase | SAMN05216290_1028 | Not Available | Positive | 1163356 - 1164222 | 32925.3 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05216290_1029 | Not Available | Positive | 1164312 - 1165403 | 42497.4 |
| iron complex transport system substrate-binding protein | SAMN05216290_1030 | Not Available | Positive | 1165647 - 1166846 | 45505.8 |
| iron complex transport system permease protein | SAMN05216290_1031 | Not Available | Positive | 1166867 - 1167919 | 36878.6 |
| iron complex transport system atp-binding protein | SAMN05216290_1032 | Not Available | Positive | 1167921 - 1168934 | 36946.2 |
| vitamin b12 transporter | SAMN05216290_1033 | Not Available | Positive | 1168915 - 1170789 | 68804.0 |
| mj0570-related uncharacterized domain-containing protein | SAMN05216290_1034 | Not Available | Positive | 1170793 - 1171476 | 25431.1 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05216290_1035 | Not Available | Positive | 1171488 - 1171991 | 19303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
