Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_1016 | Not Available | Negative | 1145443 - 1148037 | 97028.8 |
| hypothetical protein | SAMN05216290_1017 | Not Available | Positive | 1148072 - 1148170 | 3830.91 |
| iron complex outermembrane recepter protein | SAMN05216290_1018 | Not Available | Positive | 1148466 - 1151423 | 108596.0 |
| starch-binding associating with outer membrane | SAMN05216290_1019 | Not Available | Positive | 1151430 - 1153028 | 58076.1 |
| protein of unknown function | SAMN05216290_1020 | Not Available | Positive | 1153072 - 1154184 | 40588.3 |
| arabinogalactan endo-1,4-beta-galactosidase | SAMN05216290_1021 | Not Available | Positive | 1154275 - 1155435 | 43217.7 |
| beta-galactosidase | SAMN05216290_1022 | Not Available | Positive | 1155447 - 1157894 | 91886.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05216290_1023 | Not Available | Negative | 1157960 - 1158700 | 28451.1 |
| solute:na+ symporter, sss family | SAMN05216290_1024 | Not Available | Positive | 1159043 - 1160611 | 56128.0 |
| galactokinase | SAMN05216290_1025 | Not Available | Positive | 1160611 - 1161783 | 43250.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
