Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN05216290_1006 | Not Available | Negative | 1136496 - 1137239 | 27451.0 |
| putative membrane protein | SAMN05216290_1007 | Not Available | Negative | 1137241 - 1138176 | 34173.5 |
| phosphosulfolactate synthase | SAMN05216290_1008 | Not Available | Negative | 1138179 - 1138943 | 28914.6 |
| tetratricopeptide repeat-containing protein | SAMN05216290_1009 | Not Available | Negative | 1138944 - 1140347 | 54601.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216290_1010 | Not Available | Negative | 1140492 - 1141478 | 36851.5 |
| tyrosine-protein phosphatase ywqe | SAMN05216290_1011 | Not Available | Negative | 1141481 - 1142221 | 28021.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05216290_1012 | Not Available | Negative | 1142218 - 1142763 | 20488.2 |
| gtp-binding protein hflx | SAMN05216290_1013 | Not Available | Positive | 1142901 - 1144097 | 45871.5 |
| Trna-arg | Not Available | Not Available | Positive | 1144251 - 1144322 | Not Available |
| transcriptional regulator, laci family | SAMN05216290_1015 | Not Available | Positive | 1144389 - 1145408 | 37642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
