Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage ii sporulation protein e (spoiie) | SAMN05216290_0996 | Not Available | Negative | 1121299 - 1123332 | 78149.0 |
| aspartyl-trna synthetase | SAMN05216290_0997 | Not Available | Negative | 1123437 - 1125188 | 66280.1 |
| trna(adenine34) deaminase | SAMN05216290_0998 | Not Available | Positive | 1125269 - 1125718 | 16308.6 |
| superoxide dismutase, fe-mn family | SAMN05216290_0999 | Not Available | Positive | 1125752 - 1126357 | 21965.4 |
| protein of unknown function | SAMN05216290_1000 | Not Available | Positive | 1126545 - 1128494 | 74620.1 |
| transglutaminase-like superfamily protein | SAMN05216290_1001 | Not Available | Positive | 1128496 - 1130400 | 72218.0 |
| outer membrane protein ompa | SAMN05216290_1002 | Not Available | Negative | 1130451 - 1131800 | 50093.4 |
| ammonium transporter | SAMN05216290_1003 | Not Available | Negative | 1132046 - 1133392 | 47222.2 |
| excinuclease abc subunit b | SAMN05216290_1004 | Not Available | Negative | 1133648 - 1135672 | 76979.2 |
| hypothetical protein | SAMN05216290_1005 | Not Available | Negative | 1135755 - 1136432 | 25894.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
