Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udpglucose 6-dehydrogenase | SAMN05216290_0986 | Not Available | Negative | 1111046 - 1112362 | 48186.2 |
| udp-galactose 4-epimerase | SAMN05216290_0987 | Not Available | Negative | 1112461 - 1113480 | 37644.0 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05216290_0988 | Not Available | Positive | 1113563 - 1114582 | 38732.8 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05216290_0989 | Not Available | Positive | 1114579 - 1115439 | 31352.9 |
| moxr-like atpase | SAMN05216290_0990 | Not Available | Negative | 1115436 - 1116401 | 35778.3 |
| periplasmic chaperone for outer membrane proteins sura | SAMN05216290_0991 | Not Available | Negative | 1116403 - 1117767 | 51291.3 |
| hypothetical protein | SAMN05216290_0992 | Not Available | Negative | 1117724 - 1118602 | 34507.8 |
| peptidyl-prolyl cis-trans isomerase sura | SAMN05216290_0993 | Not Available | Negative | 1118592 - 1120511 | 72890.0 |
| serine/threonine-protein kinase rsbw | SAMN05216290_0994 | Not Available | Negative | 1120524 - 1120943 | 15893.3 |
| anti-sigma b factor antagonist | SAMN05216290_0995 | Not Available | Negative | 1120933 - 1121277 | 12628.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
