Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yece, duf72 family | SAMN05216290_0081 | Not Available | + | 76358 - 77251 | 34715.9 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family | SAMN05216290_0082 | Not Available | - | 77257 - 78732 | 54781.9 |
| iron complex outermembrane recepter protein | SAMN05216290_0083 | Not Available | - | 78809 - 80983 | 80721.1 |
| hypothetical protein | SAMN05216290_0084 | Not Available | - | 81026 - 81340 | 11311.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216290_0085 | Not Available | + | 81507 - 82403 | 33036.0 |
| histidine kinase | SAMN05216290_0086 | Not Available | + | 82475 - 83515 | 39320.8 |
| two component transcriptional regulator, lyttr family | SAMN05216290_0087 | Not Available | + | 83512 - 84231 | 28051.0 |
| dinb superfamily protein | SAMN05216290_0088 | Not Available | + | 84309 - 84839 | 20409.7 |
| transposase is200 like | SAMN05216290_0089 | Not Available | - | 85233 - 85748 | 20301.7 |
| predicted dehydrogenase | SAMN05216290_0090 | Not Available | + | 85842 - 86939 | 40888.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
