Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216290_0061 | Not Available | + | 56666 - 57310 | 25498.6 |
| protein of unknown function | SAMN05216290_0062 | Not Available | + | 57399 - 60389 | 113538.0 |
| l-lactate dehydrogenase (cytochrome) | SAMN05216290_0063 | Not Available | + | 60545 - 61696 | 42711.8 |
| beta-xylosidase | SAMN05216290_0064 | Not Available | + | 61782 - 63296 | 56919.8 |
| thioredoxin reductase (nadph) | SAMN05216290_0065 | Not Available | + | 63666 - 64673 | 36429.7 |
| ferredoxin, 2fe-2s | SAMN05216290_0066 | Not Available | + | 64686 - 65006 | 11665.0 |
| nad(p)h-binding | SAMN05216290_0067 | Not Available | - | 65057 - 65719 | 24209.9 |
| 4-oxalocrotonate tautomerase | SAMN05216290_0068 | Not Available | - | 65976 - 66203 | 8597.27 |
| hypothetical protein | SAMN05216290_0069 | Not Available | - | 66221 - 67273 | 38406.3 |
| cupin domain protein | SAMN05216290_0070 | Not Available | - | 67285 - 67791 | 18645.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
