Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN05216290_4068 | Not Available | - | 4621806 - 4624256 | 92242.2 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05216290_4069 | Not Available | + | 4624466 - 4625842 | 51734.9 |
| hypothetical protein | SAMN05216290_4070 | Not Available | + | 4625852 - 4626364 | 19477.2 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05216290_4071 | Not Available | + | 4626364 - 4627695 | 50875.7 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05216290_4072 | Not Available | + | 4627807 - 4629702 | 71208.9 |
| hypothetical protein | SAMN05216290_4073 | Not Available | - | 4629902 - 4630744 | 32391.7 |
| lycopene beta-cyclase | SAMN05216290_4074 | Not Available | + | 4630894 - 4632057 | 44476.4 |
| cardiolipin synthase | SAMN05216290_4075 | Not Available | + | 4632099 - 4633556 | 55849.9 |
| cyanophycinase | SAMN05216290_4076 | Not Available | + | 4633560 - 4634579 | 37826.7 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05216290_4077 | Not Available | + | 4634776 - 4635963 | 44804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
