Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | SAMN05216290_4018 | Not Available | + | 4562506 - 4564119 | 60040.0 |
| yidc/oxa1 family membrane protein insertase | SAMN05216290_4019 | Not Available | + | 4564130 - 4565959 | 68345.4 |
| hypothetical protein | SAMN05216290_4020 | Not Available | + | 4566044 - 4567150 | 40763.2 |
| hypothetical protein | SAMN05216290_4021 | Not Available | + | 4567207 - 4567869 | 24658.8 |
| ethanolamine ammonia-lyase light chain /ethanolamine ammonia-lyase heavy chain | SAMN05216290_4022 | Not Available | + | 4567974 - 4570298 | 86029.1 |
| hypothetical protein | SAMN05216290_4023 | Not Available | + | 4570374 - 4571066 | 25617.1 |
| hypothetical protein | SAMN05216290_4024 | Not Available | + | 4571072 - 4571605 | 20524.2 |
| biopolymer transport protein exbd/tolr | SAMN05216290_4025 | Not Available | + | 4571682 - 4572317 | 24594.6 |
| selenocysteine lyase/cysteine desulfurase | SAMN05216290_4026 | Not Available | - | 4572405 - 4573697 | 48827.9 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05216290_4027 | Not Available | + | 4573862 - 4574737 | 31947.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
