Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanine transaminase/branched-chain amino acid aminotransferase | SAMN05216290_0031 | Not Available | - | 30156 - 30995 | 31205.7 |
| dnaj domain-containing protein | SAMN05216290_0032 | Not Available | + | 31037 - 31834 | 30483.3 |
| thiamine-phosphate kinase | SAMN05216290_0033 | Not Available | - | 31820 - 32881 | 38756.2 |
| methylmalonyl-coa epimerase | SAMN05216290_0034 | Not Available | - | 32968 - 33369 | 14765.8 |
| hypothetical protein | SAMN05216290_0035 | Not Available | + | 33502 - 33912 | 15617.5 |
| iron-sulfur cluster assembly protein | SAMN05216290_0036 | Not Available | + | 33912 - 34238 | 11956.2 |
| amidophosphoribosyltransferase | SAMN05216290_0037 | Not Available | - | 34423 - 36309 | 72301.0 |
| nadh dehydrogenase subunit n | SAMN05216290_0038 | Not Available | - | 36319 - 37827 | 55386.2 |
| nadh dehydrogenase subunit m | SAMN05216290_0039 | Not Available | - | 37827 - 39536 | 62771.0 |
| nadh dehydrogenase subunit l | SAMN05216290_0040 | Not Available | - | 39540 - 41675 | 79259.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
