Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05216290_3978 | Not Available | + | 4512622 - 4513824 | 45116.6 |
| hypothetical protein | SAMN05216290_3979 | Not Available | - | 4513821 - 4515071 | 47892.4 |
| multidrug efflux pump subunit acrb | SAMN05216290_3980 | Not Available | - | 4515252 - 4518716 | 127688.0 |
| rnd family efflux transporter, mfp subunit | SAMN05216290_3981 | Not Available | - | 4518735 - 4519871 | 41333.1 |
| outer membrane protein tolc | SAMN05216290_3982 | Not Available | - | 4519911 - 4521257 | 50386.9 |
| transcriptional regulator, tetr family | SAMN05216290_3983 | Not Available | - | 4521232 - 4521870 | 25166.4 |
| glycerol-3-phosphate dehydrogenase | SAMN05216290_3984 | Not Available | - | 4522164 - 4523714 | 57463.4 |
| glycerol kinase | SAMN05216290_3985 | Not Available | - | 4523742 - 4525232 | 54877.4 |
| reactive intermediate/imine deaminase | SAMN05216290_3986 | Not Available | + | 4525293 - 4525757 | 16907.2 |
| hypothetical protein | SAMN05216290_3987 | Not Available | + | 4525886 - 4526758 | 33455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
