Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05216290_3924 | Not Available | - | 4447402 - 4447965 | 21276.4 |
| hypothetical protein | SAMN05216290_3925 | Not Available | - | 4447955 - 4448323 | 13381.4 |
| hypothetical protein | SAMN05216290_3926 | Not Available | - | 4448331 - 4448915 | 23014.2 |
| atp-dependent dna helicase recq | SAMN05216290_3927 | Not Available | - | 4448936 - 4450870 | 73665.9 |
| nad kinase | SAMN05216290_3928 | Not Available | - | 4450925 - 4451845 | 33607.9 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05216290_3929 | Not Available | - | 4451849 - 4452865 | 38644.4 |
| 8-oxo-dgtp diphosphatase | SAMN05216290_3930 | Not Available | - | 4452955 - 4453635 | 26103.1 |
| competence protein comec | SAMN05216290_3931 | Not Available | - | 4453672 - 4455759 | 78486.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05216290_3932 | Not Available | + | 4455917 - 4456561 | 24514.6 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05216290_3933 | Not Available | - | 4456578 - 4457903 | 48449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
