Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | SAMN05216290_0011 | Not Available | + | 10613 - 11938 | 50651.9 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05216290_0012 | Not Available | + | 12023 - 12691 | 24914.1 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05216290_0013 | Not Available | + | 12696 - 13922 | 45555.9 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05216290_0014 | Not Available | - | 13983 - 14399 | 16019.3 |
| adp-glyceromanno-heptose 6-epimerase precursor | SAMN05216290_0015 | Not Available | + | 14469 - 15434 | 36974.8 |
| anti-sigma-k factor rska | SAMN05216290_0016 | Not Available | - | 15457 - 16263 | 29114.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216290_0017 | Not Available | - | 16265 - 16819 | 21115.5 |
| dihydrolipoamide dehydrogenase | SAMN05216290_0018 | Not Available | - | 16824 - 18218 | 49464.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05216290_0019 | Not Available | + | 18384 - 19130 | 26032.3 |
| hypothetical protein | SAMN05216290_0020 | Not Available | + | 19238 - 21325 | 77663.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
