Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Roseivirgaceae
Genus
Roseivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Roseivirgaceae |
| Genus | Roseivirga |
| Species | Roseivirga pacifica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1371905 bp
Thymine Count
1333517 bp
Guanine Count
958689 bp
Cytosine Count
996660 bp
Genome Length
4660771 bp
Protein-coding Genes
4021 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | SAMN05216290_0091 | Not Available | - | 87087 - 88256 | 42663.1 |
| l-threonine aldolase | SAMN05216290_0092 | Not Available | - | 88259 - 89275 | 37182.7 |
| glycerophosphoryl diester phosphodiesterase | SAMN05216290_0093 | Not Available | - | 89272 - 90225 | 34867.6 |
| transcriptional regulator, marr family | SAMN05216290_0094 | Not Available | - | 90399 - 90857 | 17890.6 |
| protein of unknown function | SAMN05216290_0095 | Not Available | - | 90990 - 91400 | 15102.1 |
| hypothetical protein | SAMN05216290_0096 | Not Available | - | 91397 - 91624 | 8441.66 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216290_0097 | Not Available | + | 92288 - 94612 | 86306.9 |
| hypothetical protein | SAMN05216290_0098 | Not Available | + | 94700 - 94819 | 4736.73 |
| susd family protein | SAMN05216290_0099 | Not Available | - | 94875 - 96362 | 55248.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216290_0100 | Not Available | - | 96380 - 99589 | 117412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
