Pseudomonas graminis strain DSM 11363

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas graminis strain DSM 11363 is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number FOHW00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil and plant environments. This particular strain could play a role in plant interactions, possibly influencing plant health or soil dynamics. The presence of a single replicon suggests a potential for efficient replication and regulation of its genome, which may be advantageous in competitive ecosystems. In ecological contexts, Pseudomonas graminis may contribute to nutrient cycling or plant growth promotion, although the specific interactions and mechanisms remain to be explored further. Understanding the traits of DSM 11363 can provide insights into the functional roles of Pseudomonas species in their habitats and their potential utility in biotechnological applications, such as bioremediation or as biofertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas graminis
Strainstrain DSM 11363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas graminis strain DSM 11363
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas graminis strain DSM 11363 genome assembly, contig:

Gene Summary

Adenine Count

1162239 bp

Thymine Count

1160684 bp

Guanine Count

1761091 bp

Cytosine Count

1761470 bp

Genome Length

5852045 bp

Protein-coding Genes

5140 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive5176778 - 5176790Not Available
IntegraseSAMN05216197_14510Not AvailablePositive5176907 - 517819648595.1
Hypothetical proteinSAMN05216197_14511Not AvailablePositive5178193 - 517851911933.3
Nad-dependent dna ligase subunit aSAMN05216197_14512Not AvailablePositive5178522 - 51787137152.75
Hypothetical proteinSAMN05216197_14513Not AvailablePositive5178717 - 517928021076.2
Bacteriophage lysis proteinSAMN05216197_14514Not AvailablePositive5179483 - 517981211928.6
phage lysis regulatory protein, lysb familySAMN05216197_14515Not AvailablePositive5179809 - 518019513854.6
P58SAMN05216197_14516Not AvailablePositive5180591 - 518093212897.2
Gp80SAMN05216197_14517Not AvailablePositive5181096 - 518158417479.5
Putative large subunit terminaseSAMN05216197_14518Not AvailablePositive5181588 - 518326760634.2

Displaying genes 71 – 80 of 5325 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.