Pseudomonas graminis strain DSM 11363

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas graminis strain DSM 11363 is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number FOHW00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil and plant environments. This particular strain could play a role in plant interactions, possibly influencing plant health or soil dynamics. The presence of a single replicon suggests a potential for efficient replication and regulation of its genome, which may be advantageous in competitive ecosystems. In ecological contexts, Pseudomonas graminis may contribute to nutrient cycling or plant growth promotion, although the specific interactions and mechanisms remain to be explored further. Understanding the traits of DSM 11363 can provide insights into the functional roles of Pseudomonas species in their habitats and their potential utility in biotechnological applications, such as bioremediation or as biofertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas graminis
Strainstrain DSM 11363

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas graminis strain DSM 11363
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas graminis strain DSM 11363 genome assembly, contig:

Gene Summary

Adenine Count

1162239 bp

Thymine Count

1160684 bp

Guanine Count

1761091 bp

Cytosine Count

1761470 bp

Genome Length

5852045 bp

Protein-coding Genes

5140 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phage head-tail connectorSAMN05216197_12487Not AvailableNegative3985145 - 398563017133.7
Hypothetical proteinSAMN05216197_12488Not AvailableNegative3985634 - 398606215337.1
Major capsid proteinSAMN05216197_12489Not AvailableNegative3986111 - 398748749509.2
Clpp proteaseSAMN05216197_12490Not AvailableNegative3987499 - 398834130211.6
Portal proteinSAMN05216197_12491Not AvailableNegative3988345 - 398965547978.5
Hypothetical proteinSAMN05216197_12492Not AvailableNegative3989648 - 39898125478.92
Gp2, phage terminase, large subunit, putativeSAMN05216197_12493Not AvailableNegative3989809 - 399154265059.4
Gp1SAMN05216197_12494Not AvailableNegative3991542 - 399202717340.9
Putative class i holinSAMN05216197_12495Not AvailableNegative3992231 - 399259013271.9
AttlNot AvailableNot AvailablePositive4624322 - 4624333Not Available

Displaying genes 31 – 40 of 5325 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.