Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter actinosclerus |
| Strain | strain DSM 15310 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
833791 bp
Thymine Count
837575 bp
Guanine Count
1367082 bp
Cytosine Count
1365363 bp
Genome Length
4405206 bp
Protein-coding Genes
3680 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04487998_0561 | Not Available | Positive | 616062 - 618311 | 81358.2 |
| hypothetical protein | SAMN04487998_0562 | Not Available | Positive | 618423 - 618632 | 7469.74 |
| l,d-transpeptidase catalytic domain | SAMN04487998_0563 | Not Available | Positive | 618757 - 619611 | 29757.9 |
| hypothetical protein | SAMN04487998_0564 | Not Available | Positive | 619631 - 620008 | 13767.3 |
| l,d-transpeptidase catalytic domain | SAMN04487998_0565 | Not Available | Positive | 620243 - 621076 | 30820.2 |
| aspartate aminotransferase | SAMN04487998_0566 | Not Available | Negative | 621150 - 622346 | 44212.1 |
| glycosyl hydrolases family 16 | SAMN04487998_0567 | Not Available | Negative | 623124 - 624002 | 32990.6 |
| putative membrane protein | SAMN04487998_0568 | Not Available | Negative | 624047 - 624364 | 11999.6 |
| small-conductance mechanosensitive channel | SAMN04487998_0569 | Not Available | Positive | 624476 - 625522 | 38455.7 |
| protein of unknown function | SAMN04487998_0570 | Not Available | Negative | 625901 - 626152 | 9018.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
