Methanococcoides vulcani strain SLH 33

Coccianaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanococcoides

Description

Methanococcoides vulcani strain SLH 33 is an anaerobic archaeon characterized by its cocci shape and the presence of flagella. This strain belongs to the Methanococcoides genus, which is known for its role in methanogenesis, a crucial process in the carbon cycle where methane is produced by microorganisms in anaerobic environments. The strain has a single replicon, indicating a simplified genomic organization that is typical for many archaeal species. The accession number for this strain is FOHQ00000000.1, which can be used for further genomic and taxonomic studies. The anaerobic nature of M. vulcani strain SLH 33 suggests its ecological niche in environments devoid of oxygen, such as deep-sea hydrothermal vents or anaerobic sediments, where it potentially contributes to methane production. The presence of flagella may facilitate mobility within its habitat, allowing it to navigate through sediment or microbial mats. Overall, Methanococcoides vulcani strain SLH 33 exemplifies the adaptations of microorganisms to extreme environments, emphasizing their role in biogeochemical cycles and the importance of anaerobic methanogens in maintaining ecological balance in their respective habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanococcoides
SpeciesMethanococcoides vulcani
Strainstrain SLH 33

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanococcoides vulcani strain SLH 33 genome assembly, contig:

Gene Summary

Adenine Count

629666 bp

Thymine Count

678704 bp

Guanine Count

510031 bp

Cytosine Count

494952 bp

Genome Length

2314846 bp

Protein-coding Genes

2179 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488587_0089Not AvailablePositive29053 - 2939712596.2
protein of unknown functionSAMN04488587_0091Not AvailableNegative30420 - 3081215279.5
flavodoxin, short chainSAMN04488587_0092Not AvailableNegative30866 - 3130616355.3
feoc like transcriptional regulatorSAMN04488587_0093Not AvailablePositive31713 - 319769400.47
iron (metal) dependent repressor, dtxr familySAMN04488587_0094Not AvailableNegative32044 - 3249617146.5
formylmethanofuran dehydrogenase subunit cSAMN04488587_0095Not AvailableNegative32604 - 3357834881.6
4fe-4s dicluster domain-containing proteinSAMN04488587_0096Not AvailableNegative33585 - 3395313391.3
predicted metal-binding proteinSAMN04488587_0097Not AvailableNegative33984 - 3432212625.3
hypothetical proteinSAMN04488587_0098Not AvailableNegative34332 - 3511429155.9
nitrite/sulfite reductase ferredoxin-like half domain-containing proteinSAMN04488587_0099Not AvailableNegative35248 - 3590723622.0

Displaying genes 31 – 40 of 2230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.