Lachnobacterium bovis strain S1b

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnobacterium

Description

Lachnobacterium bovis strain S1b is a bacterium primarily found in the rumen of ruminant animals, specifically Bos taurus (cattle) and Ovis aries (sheep). This strain is characterized by having a single replicon, indicating a streamlined genetic structure that may play a role in its adaptation to the ruminal environment. The presence of Lachnobacterium bovis in the rumen suggests its involvement in the complex microbial ecosystem essential for the digestion of fibrous plant materials. Rumen bacteria, including this strain, contribute to the fermentation process by breaking down cellulose and producing volatile fatty acids, which are vital energy sources for the host animals. The accession number for Lachnobacterium bovis strain S1b is FOGW00000000.1, which provides a reference for genomic studies and further research into its metabolic capabilities and interactions within the rumen microbiome. The study of this bacterium can offer insights into the nutritional efficiency of ruminants and the overall health of their digestive systems, highlighting the importance of microbial diversity in maintaining ecological balance within the rumen habitat. Understanding the role of Lachnobacterium bovis and similar strains could lead to advancements in livestock management and breeding strategies aimed at improving feed efficiency and animal health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnobacterium
SpeciesLachnobacterium bovis
Strainstrain S1b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Bos taurus, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnobacterium bovis strain S1b genome assembly, contig:

Gene Summary

Adenine Count

897334 bp

Thymine Count

855002 bp

Guanine Count

415401 bp

Cytosine Count

365917 bp

Genome Length

2535708 bp

Protein-coding Genes

2270 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseSAMN02910429_00889Not AvailablePositive1006180 - 100700730589.5
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseSAMN02910429_00890Not AvailablePositive1007044 - 100851654540.5
4-hydroxy-tetrahydrodipicolinate synthaseSAMN02910429_00891Not AvailablePositive1008536 - 100942031555.2
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN02910429_00892Not AvailablePositive1009502 - 101012823288.2
protein of unknown functionSAMN02910429_00893Not AvailableNegative1010216 - 101073119928.5
transcription termination factor rhoSAMN02910429_00894Not AvailablePositive1011113 - 101282864683.9
large subunit ribosomal protein l31SAMN02910429_00895Not AvailablePositive1013039 - 10132397516.04
uncharacterized conserved protein yqhqSAMN02910429_00896Not AvailablePositive1013505 - 101443735613.3
release factor glutamine methyltransferaseSAMN02910429_00897Not AvailablePositive1014427 - 101525731454.9
peptide chain release factor 1SAMN02910429_00898Not AvailablePositive1015320 - 101639640528.2

Displaying genes 891 – 900 of 2348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.