Lachnobacterium bovis strain S1b

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnobacterium

Description

Lachnobacterium bovis strain S1b is a bacterium primarily found in the rumen of ruminant animals, specifically Bos taurus (cattle) and Ovis aries (sheep). This strain is characterized by having a single replicon, indicating a streamlined genetic structure that may play a role in its adaptation to the ruminal environment. The presence of Lachnobacterium bovis in the rumen suggests its involvement in the complex microbial ecosystem essential for the digestion of fibrous plant materials. Rumen bacteria, including this strain, contribute to the fermentation process by breaking down cellulose and producing volatile fatty acids, which are vital energy sources for the host animals. The accession number for Lachnobacterium bovis strain S1b is FOGW00000000.1, which provides a reference for genomic studies and further research into its metabolic capabilities and interactions within the rumen microbiome. The study of this bacterium can offer insights into the nutritional efficiency of ruminants and the overall health of their digestive systems, highlighting the importance of microbial diversity in maintaining ecological balance within the rumen habitat. Understanding the role of Lachnobacterium bovis and similar strains could lead to advancements in livestock management and breeding strategies aimed at improving feed efficiency and animal health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnobacterium
SpeciesLachnobacterium bovis
Strainstrain S1b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Bos taurus, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnobacterium bovis strain S1b genome assembly, contig:

Gene Summary

Adenine Count

897334 bp

Thymine Count

855002 bp

Guanine Count

415401 bp

Cytosine Count

365917 bp

Genome Length

2535708 bp

Protein-coding Genes

2270 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN02910429_00557Not AvailablePositive640498 - 64134332444.1
polymer-forming proteinSAMN02910429_00558Not AvailablePositive641382 - 64217928039.7
uridylate kinaseSAMN02910429_00559Not AvailablePositive642193 - 64288825262.7
ribosome recycling factorSAMN02910429_00560Not AvailablePositive642905 - 64345921022.3
undecaprenyl diphosphate synthaseSAMN02910429_00561Not AvailablePositive643545 - 64428228262.7
phosphatidate cytidylyltransferaseSAMN02910429_00562Not AvailablePositive644357 - 64516029800.5
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN02910429_00563Not AvailablePositive645235 - 64637742155.5
regulator of sigma e proteaseSAMN02910429_00564Not AvailablePositive646379 - 64752741796.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseSAMN02910429_00565Not AvailablePositive647546 - 64860137697.1
dna polymerase-3 subunit alphaSAMN02910429_00566Not AvailablePositive648604 - 653148171655.0

Displaying genes 561 – 570 of 2348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.