Lachnobacterium bovis strain S1b

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnobacterium

Description

Lachnobacterium bovis strain S1b is a bacterium primarily found in the rumen of ruminant animals, specifically Bos taurus (cattle) and Ovis aries (sheep). This strain is characterized by having a single replicon, indicating a streamlined genetic structure that may play a role in its adaptation to the ruminal environment. The presence of Lachnobacterium bovis in the rumen suggests its involvement in the complex microbial ecosystem essential for the digestion of fibrous plant materials. Rumen bacteria, including this strain, contribute to the fermentation process by breaking down cellulose and producing volatile fatty acids, which are vital energy sources for the host animals. The accession number for Lachnobacterium bovis strain S1b is FOGW00000000.1, which provides a reference for genomic studies and further research into its metabolic capabilities and interactions within the rumen microbiome. The study of this bacterium can offer insights into the nutritional efficiency of ruminants and the overall health of their digestive systems, highlighting the importance of microbial diversity in maintaining ecological balance within the rumen habitat. Understanding the role of Lachnobacterium bovis and similar strains could lead to advancements in livestock management and breeding strategies aimed at improving feed efficiency and animal health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnobacterium
SpeciesLachnobacterium bovis
Strainstrain S1b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Bos taurus, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnobacterium bovis strain S1b genome assembly, contig:

Gene Summary

Adenine Count

897334 bp

Thymine Count

855002 bp

Guanine Count

415401 bp

Cytosine Count

365917 bp

Genome Length

2535708 bp

Protein-coding Genes

2270 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6,7-dimethyl-8-ribityllumazine synthaseSAMN02910429_00113Not AvailableNegative136224 - 13669716588.3
3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase iiSAMN02910429_00114Not AvailableNegative136817 - 13805546851.4
riboflavin synthase alpha chainSAMN02910429_00115Not AvailableNegative138094 - 13879225612.1
diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductaseSAMN02910429_00116Not AvailableNegative138817 - 14016650624.4
putative iron-only hydrogenase system regulatorSAMN02910429_00118Not AvailablePositive140809 - 1410639175.51
2-iminoacetate synthaseSAMN02910429_00119Not AvailablePositive141095 - 14254354707.2
[fefe] hydrogenase h-cluster maturation gtpase hydfSAMN02910429_00120Not AvailablePositive142556 - 14376744515.1
ggdef domain-containing protein, diguanylate cyclase (c-di-gmp synthetase) or its enzymatically inactive variantsSAMN02910429_00121Not AvailableNegative143849 - 14506647562.2
Trna-glyNot AvailableNot AvailablePositive145276 - 145348Not Available
Trna-glyNot AvailableNot AvailablePositive145447 - 145519Not Available

Displaying genes 121 – 130 of 2348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.