Nitrosomonas ureae strain Nm9

Gram-negativeNAaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas ureae strain Nm9 is a Gram-negative bacterium notable for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain is primarily found in freshwater environments, particularly within the freshwater area of the River Schelde Estuary, as well as in marine habitats and Mediterranean soils. Its ecological niche emphasizes its adaptability to varying aquatic conditions. The bacterium exhibits an aerobic metabolism, requiring oxygen for its growth and survival. Nitrosomonas ureae strain Nm9 is mesophilic, thriving in moderate temperature ranges typical of many freshwater and marine ecosystems. The presence of flagella allows for motility, which may facilitate its interactions within microbial communities and its movement towards nutrient sources. Genetically, this strain is characterized by having a single replicon, with its genomic data accessible under the accession number FOFX00000000.1. This genomic information could provide insights into its metabolic pathways and ecological functions. In summary, Nitrosomonas ureae strain Nm9 plays a significant role in nitrogen cycling in various aquatic environments, contributing to nutrient dynamics and ecosystem health. Its adaptability to both freshwater and marine habitats highlights the importance of such microorganisms in maintaining ecological balance and supporting biodiversity in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas ureae
Strainstrain Nm9

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatFresh water; freshwater area of the River Schelde Estuary; Marine; Mediterranean soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas ureae strain Nm9 genome assembly, contig:

Gene Summary

Adenine Count

924405 bp

Thymine Count

929484 bp

Guanine Count

741714 bp

Cytosine Count

741278 bp

Genome Length

3337185 bp

Protein-coding Genes

3160 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal-body rod protein flgcSAMN05421510_100285Not AvailableNegative327039 - 32744314307.0
flagellar basal-body rod protein flgbSAMN05421510_100286Not AvailableNegative327447 - 32785715170.0
flagella basal body p-ring formation protein flgaSAMN05421510_100287Not AvailablePositive328049 - 32879826914.0
phosphopantetheine attachment siteSAMN05421510_100288Not AvailablePositive328924 - 32920210178.6
uncharacterized conserved protein, contains mth938-like domainSAMN05421510_100289Not AvailablePositive329299 - 32966714045.2
hypothetical proteinSAMN05421510_100290Not AvailablePositive329764 - 3298563390.26
hypothetical proteinSAMN05421510_100291Not AvailableNegative330146 - 33142648779.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05421510_100292Not AvailablePositive331913 - 33435492506.1
pas domain s-box-containing proteinSAMN05421510_100293Not AvailablePositive334384 - 33578752084.2
biopolymer transport protein exbdSAMN05421510_100294Not AvailableNegative335765 - 33618415484.0

Displaying genes 301 – 310 of 3201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.