Pseudomonas soli strain LMG 27941

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas soli strain LMG 27941 is a singular bacterium characterized by a single replicon, which indicates its genetic material is organized within a single circular DNA molecule. This trait can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number FOEQ00000000.1, which provides a reference point for researchers seeking to access its genomic data. As a member of the Pseudomonas genus, Pseudomonas soli is expected to exhibit traits commonly associated with this group, such as metabolic versatility and the ability to thrive in diverse environments. Members of the Pseudomonas genus are often found in soil and water, where they play significant roles in nutrient cycling and organic matter decomposition. Their adaptability allows them to occupy various ecological niches, contributing to soil health and functioning. In ecological contexts, the presence of Pseudomonas soli and similar strains can be indicative of soil quality and microbial diversity. They may also interact with other microorganisms, influencing community dynamics and overall ecosystem resilience. Understanding the specific traits of Pseudomonas soli LMG 27941 can provide insights into its ecological role and potential applications in biotechnology, such as bioremediation or agricultural enhancement.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas soli
Strainstrain LMG 27941

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas soli strain LMG 27941
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas soli strain LMG 27941 genome assembly, contig:

Gene Summary

Adenine Count

1018318 bp

Thymine Count

1012373 bp

Guanine Count

1801864 bp

Cytosine Count

1808150 bp

Genome Length

5644909 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane fusion protein, multidrug efflux systemSAMN05216230_101504Not AvailablePositive535329 - 53648341252.1
multidrug efflux pumpSAMN05216230_101505Not AvailablePositive536487 - 539639112893.0
outer membrane protein, multidrug efflux systemSAMN05216230_101506Not AvailablePositive539636 - 54108152545.9
outer membrane porin, oprd familySAMN05216230_101507Not AvailablePositive541310 - 54256346042.2
transcriptional regulator, lysr familySAMN05216230_101508Not AvailablePositive542770 - 54375335695.9
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN05216230_101509Not AvailableNegative543653 - 54433925647.1
uncharacterized membrane protein ygl010wSAMN05216230_101510Not AvailablePositive544432 - 54495618926.7
4-carboxymuconolactone decarboxylaseSAMN05216230_101511Not AvailableNegative545012 - 54540414830.7
3-oxoadipate enol-lactonaseSAMN05216230_101512Not AvailableNegative545415 - 54620628450.9
3-carboxy-cis,cis-muconate cycloisomeraseSAMN05216230_101513Not AvailableNegative546219 - 54757148219.4

Displaying genes 631 – 640 of 5172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.