Pseudomonas soli strain LMG 27941

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas soli strain LMG 27941 is a singular bacterium characterized by a single replicon, which indicates its genetic material is organized within a single circular DNA molecule. This trait can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number FOEQ00000000.1, which provides a reference point for researchers seeking to access its genomic data. As a member of the Pseudomonas genus, Pseudomonas soli is expected to exhibit traits commonly associated with this group, such as metabolic versatility and the ability to thrive in diverse environments. Members of the Pseudomonas genus are often found in soil and water, where they play significant roles in nutrient cycling and organic matter decomposition. Their adaptability allows them to occupy various ecological niches, contributing to soil health and functioning. In ecological contexts, the presence of Pseudomonas soli and similar strains can be indicative of soil quality and microbial diversity. They may also interact with other microorganisms, influencing community dynamics and overall ecosystem resilience. Understanding the specific traits of Pseudomonas soli LMG 27941 can provide insights into its ecological role and potential applications in biotechnology, such as bioremediation or agricultural enhancement.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas soli
Strainstrain LMG 27941

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas soli strain LMG 27941
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas soli strain LMG 27941 genome assembly, contig:

Gene Summary

Adenine Count

1018318 bp

Thymine Count

1012373 bp

Guanine Count

1801864 bp

Cytosine Count

1808150 bp

Genome Length

5644909 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216230_10112Not AvailableNegative11023 - 111906020.5
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05216230_10113Not AvailableNegative11337 - 1195122118.1
signal transduction histidine kinaseSAMN05216230_10114Not AvailablePositive12058 - 1367759207.2
hypothetical proteinSAMN05216230_10115Not AvailableNegative13695 - 1400610765.0
oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseSAMN05216230_10116Not AvailableNegative14208 - 1625673042.5
outer membrane porin, oprd familySAMN05216230_10117Not AvailableNegative16295 - 1752745646.5
cation/acetate symporterSAMN05216230_10118Not AvailableNegative17563 - 1912554938.5
uncharacterized membrane protein, duf485 familySAMN05216230_10119Not AvailableNegative19122 - 1943011176.0
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN05216230_10120Not AvailableNegative19529 - 2060539698.9
ring-1,2-phenylacetyl-coa epoxidase subunit paadSAMN05216230_10121Not AvailableNegative20621 - 2114518882.4

Displaying genes 171 – 180 of 5172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.