Nitrosomonas oligotropha strain Nm76

Gram-negativeNA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas oligotropha strain Nm76 is a Gram-negative bacterium known for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain possesses a single replicon, indicating a streamlined genetic structure. An important characteristic of Nitrosomonas oligotropha Nm76 is its motility, facilitated by the presence of flagella. The strain is cataloged under the accession number FODO00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Nitrosomonas genus, this bacterium is particularly adapted to oligotrophic environments, where nutrient levels are low, showcasing its ecological versatility. From a biological perspective, Nitrosomonas oligotropha Nm76 plays a critical role in soil and aquatic ecosystems by contributing to nitrification processes. This not only impacts nutrient cycling but also influences the availability of nitrogen to plants, thereby affecting overall ecosystem productivity. The ability to thrive in low-nutrient conditions exemplifies the ecological significance of this strain in maintaining nitrogen balance and supporting diverse biological communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas oligotropha
Strainstrain Nm76

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas oligotropha strain Nm76 genome assembly, contig:

Gene Summary

Adenine Count

862526 bp

Thymine Count

859774 bp

Guanine Count

806447 bp

Cytosine Count

809804 bp

Genome Length

3338551 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216333_10425Not AvailablePositive778701 - 77921017988.6
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216333_10426Not AvailableNegative779227 - 78052847883.2
hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant)SAMN05216333_10427Not AvailableNegative780558 - 78190149756.0
hypothetical proteinSAMN05216333_10428Not AvailableNegative782046 - 78290931983.3
outer membrane transport energization protein exbdSAMN05216333_10429Not AvailableNegative782921 - 78332214602.2
outer membrane transport energization protein exbbSAMN05216333_10430Not AvailableNegative783309 - 78395623977.3
hypothetical proteinSAMN05216333_10431Not AvailablePositive784278 - 78466114424.3
uncharacterized conserved protein yeao, duf488 familySAMN05216333_10432Not AvailablePositive784670 - 78502313687.4
uncharacterized conserved protein yaeq, suppresses rfah defectSAMN05216333_10433Not AvailableNegative785056 - 78559520184.2
protein of unknown functionSAMN05216333_10434Not AvailableNegative785623 - 78627024168.0

Displaying genes 751 – 760 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.