Nitrosomonas oligotropha strain Nm76

Gram-negativeNA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas oligotropha strain Nm76 is a Gram-negative bacterium known for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain possesses a single replicon, indicating a streamlined genetic structure. An important characteristic of Nitrosomonas oligotropha Nm76 is its motility, facilitated by the presence of flagella. The strain is cataloged under the accession number FODO00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Nitrosomonas genus, this bacterium is particularly adapted to oligotrophic environments, where nutrient levels are low, showcasing its ecological versatility. From a biological perspective, Nitrosomonas oligotropha Nm76 plays a critical role in soil and aquatic ecosystems by contributing to nitrification processes. This not only impacts nutrient cycling but also influences the availability of nitrogen to plants, thereby affecting overall ecosystem productivity. The ability to thrive in low-nutrient conditions exemplifies the ecological significance of this strain in maintaining nitrogen balance and supporting diverse biological communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas oligotropha
Strainstrain Nm76

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas oligotropha strain Nm76 genome assembly, contig:

Gene Summary

Adenine Count

862526 bp

Thymine Count

859774 bp

Guanine Count

806447 bp

Cytosine Count

809804 bp

Genome Length

3338551 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpbSAMN05216333_103120Not AvailableNegative667265 - 66986896766.3
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216333_103121Not AvailableNegative669934 - 673086118368.0
glutamate synthase domain-containing protein 2SAMN05216333_103122Not AvailableNegative673253 - 67474054532.8
nicotinate-nucleotide pyrophosphorylaseSAMN05216333_103123Not AvailablePositive674849 - 67570330410.7
uroporphyrinogen-iii c-methyltransferase /precorrin-2 dehydrogenaseSAMN05216333_103124Not AvailableNegative675727 - 67717853262.5
phosphate abc transporter substrate-binding protein, phot familySAMN05216333_103125Not AvailableNegative677327 - 67832236208.3
phosphoglucosamine mutaseSAMN05216333_103126Not AvailableNegative678503 - 67986449466.9
dihydropteroate synthaseSAMN05216333_103127Not AvailableNegative679861 - 68069429739.8
membrane protease ftsh catalytic subunitSAMN05216333_103128Not AvailableNegative680823 - 68274570962.8
23s rrna um-2552 2'-o-methyltransferaseSAMN05216333_103129Not AvailableNegative682919 - 68353623333.3

Displaying genes 661 – 670 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.