Nitrosomonas oligotropha strain Nm76

Gram-negativeNA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas oligotropha strain Nm76 is a Gram-negative bacterium known for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain possesses a single replicon, indicating a streamlined genetic structure. An important characteristic of Nitrosomonas oligotropha Nm76 is its motility, facilitated by the presence of flagella. The strain is cataloged under the accession number FODO00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Nitrosomonas genus, this bacterium is particularly adapted to oligotrophic environments, where nutrient levels are low, showcasing its ecological versatility. From a biological perspective, Nitrosomonas oligotropha Nm76 plays a critical role in soil and aquatic ecosystems by contributing to nitrification processes. This not only impacts nutrient cycling but also influences the availability of nitrogen to plants, thereby affecting overall ecosystem productivity. The ability to thrive in low-nutrient conditions exemplifies the ecological significance of this strain in maintaining nitrogen balance and supporting diverse biological communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas oligotropha
Strainstrain Nm76

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas oligotropha strain Nm76 genome assembly, contig:

Gene Summary

Adenine Count

862526 bp

Thymine Count

859774 bp

Guanine Count

806447 bp

Cytosine Count

809804 bp

Genome Length

3338551 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ribazole phosphataseSAMN05216333_1445Not AvailableNegative3129048 - 312970425405.3
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseSAMN05216333_1446Not AvailableNegative3129649 - 313072238051.6
adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferaseSAMN05216333_1447Not AvailableNegative3130719 - 313124919601.8
adenosylcobyric acid synthase (glutamine-hydrolysing)SAMN05216333_1448Not AvailableNegative3131246 - 313272753452.2
cob(ii)yrinic acid a,c-diamide reductaseSAMN05216333_1449Not AvailableNegative3132830 - 313349525034.4
cob(i)yrinic acid a,c-diamide adenosyltransferaseSAMN05216333_14410Not AvailableNegative3133500 - 313410522463.9
hypothetical proteinSAMN05216333_14411Not AvailableNegative3134110 - 313469121480.2
vitamin b12 transporterSAMN05216333_14412Not AvailableNegative3134707 - 313655468331.9
hlyd family secretion proteinSAMN05216333_14414Not AvailablePositive3137184 - 313808332907.8
putative abc transport system permease proteinSAMN05216333_14415Not AvailablePositive3138080 - 313924944377.9

Displaying genes 3001 – 3010 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.