Nitrosomonas oligotropha strain Nm76

Gram-negativeNA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas oligotropha strain Nm76 is a Gram-negative bacterium known for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain possesses a single replicon, indicating a streamlined genetic structure. An important characteristic of Nitrosomonas oligotropha Nm76 is its motility, facilitated by the presence of flagella. The strain is cataloged under the accession number FODO00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Nitrosomonas genus, this bacterium is particularly adapted to oligotrophic environments, where nutrient levels are low, showcasing its ecological versatility. From a biological perspective, Nitrosomonas oligotropha Nm76 plays a critical role in soil and aquatic ecosystems by contributing to nitrification processes. This not only impacts nutrient cycling but also influences the availability of nitrogen to plants, thereby affecting overall ecosystem productivity. The ability to thrive in low-nutrient conditions exemplifies the ecological significance of this strain in maintaining nitrogen balance and supporting diverse biological communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas oligotropha
Strainstrain Nm76

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas oligotropha strain Nm76 genome assembly, contig:

Gene Summary

Adenine Count

862526 bp

Thymine Count

859774 bp

Guanine Count

806447 bp

Cytosine Count

809804 bp

Genome Length

3338551 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase erfk/srfkSAMN05216333_1177Not AvailablePositive2257144 - 225833143718.1
beta-aspartyl-peptidase (threonine type)SAMN05216333_1178Not AvailablePositive2258402 - 225939734553.7
ribonucleoside-diphosphate reductase class iiSAMN05216333_1179Not AvailableNegative2259394 - 226121167086.0
polyphosphate:nucleotide phosphotransferase, ppk2 familySAMN05216333_11710Not AvailablePositive2261326 - 226214431116.3
inorganic triphosphatase ygif, contains cyth and chad domainsSAMN05216333_11711Not AvailablePositive2262201 - 226369155452.5
e3 ubiquitin ligaseSAMN05216333_11712Not AvailableNegative2263711 - 226464035469.9
lema proteinSAMN05216333_11713Not AvailableNegative2264653 - 226522521686.2
protein of unknown functionSAMN05216333_11714Not AvailablePositive2265433 - 226582513917.4
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216333_11715Not AvailablePositive2266032 - 226827584455.2
cytochrome c peroxidaseSAMN05216333_11716Not AvailablePositive2268440 - 226949538584.9

Displaying genes 2151 – 2160 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.