Nitrosomonas oligotropha strain Nm76

Gram-negativeNA

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas oligotropha strain Nm76 is a Gram-negative bacterium known for its role in the nitrogen cycle, specifically in the oxidation of ammonia to nitrite. This strain possesses a single replicon, indicating a streamlined genetic structure. An important characteristic of Nitrosomonas oligotropha Nm76 is its motility, facilitated by the presence of flagella. The strain is cataloged under the accession number FODO00000000.1, which provides a reference for its genomic data in biological databases. As a member of the Nitrosomonas genus, this bacterium is particularly adapted to oligotrophic environments, where nutrient levels are low, showcasing its ecological versatility. From a biological perspective, Nitrosomonas oligotropha Nm76 plays a critical role in soil and aquatic ecosystems by contributing to nitrification processes. This not only impacts nutrient cycling but also influences the availability of nitrogen to plants, thereby affecting overall ecosystem productivity. The ability to thrive in low-nutrient conditions exemplifies the ecological significance of this strain in maintaining nitrogen balance and supporting diverse biological communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas oligotropha
Strainstrain Nm76

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosomonas oligotropha strain Nm76 genome assembly, contig:

Gene Summary

Adenine Count

862526 bp

Thymine Count

859774 bp

Guanine Count

806447 bp

Cytosine Count

809804 bp

Genome Length

3338551 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pep-cterm protein-sorting domain-containing proteinSAMN05216333_10698Not AvailablePositive1186393 - 118738533157.3
amino acid/polyamine/organocation transporter, apc superfamilySAMN05216333_106100Not AvailablePositive1187850 - 118928651281.3
hypothetical proteinSAMN05216333_106101Not AvailablePositive1189311 - 119003026669.6
hypothetical proteinSAMN05216333_106102Not AvailablePositive1190033 - 119069224080.6
urea carboxylaseSAMN05216333_106103Not AvailablePositive1190713 - 1194327132266.0
thiopurine s-methyltransferaseSAMN05216333_106104Not AvailablePositive1194324 - 119501326169.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216333_106105Not AvailableNegative1195048 - 1198374125558.0
rare lipoprotein aSAMN05216333_106106Not AvailableNegative1199017 - 119998834657.2
cell elongation-specific peptidoglycan biosynthesis regulator rodaSAMN05216333_106107Not AvailableNegative1199985 - 120108540259.1
peptidoglycan glycosyltransferase /cell elongation-specific peptidoglycan d,d-transpeptidaseSAMN05216333_106108Not AvailableNegative1201141 - 120306071155.9

Displaying genes 1111 – 1120 of 3222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.