Duganella sp. CF517

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF517 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is a feature that can influence its genetic stability and adaptability in various environments. The genomic data for Duganella sp. CF517 is accessible under the accession number FODC00000000.1, providing a resource for further studies on its genetic makeup and potential applications. As a member of the Duganella genus, this bacterium is likely to inhabit diverse ecological niches, potentially participating in biogeochemical cycles. While specific metabolic capabilities of Duganella sp. CF517 are not detailed in the provided traits, members of this genus are generally known for their roles in soil and water ecosystems, where they may contribute to nutrient cycling and organic matter decomposition. Understanding the characteristics of Duganella sp. CF517 can provide insights into its ecological roles and interactions within its environment. Its Gram-negative nature suggests it may possess features such as a thin peptidoglycan layer and an outer membrane, which can influence its resistance to certain antibiotics and its interactions with other microorganisms. The study of Duganella sp. CF517 could thus contribute to broader knowledge regarding microbial diversity, ecosystem function, and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF517
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF517 genome assembly, contig: Ga0115462_130, whole

Gene Summary

Adenine Count

1236343 bp

Thymine Count

1225859 bp

Guanine Count

2286360 bp

Cytosine Count

2312152 bp

Genome Length

7061117 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system protein impfSAMN05428959_10113Not AvailableNegative16456 - 1694717815.4
type vi secretion system secreted protein hcpSAMN05428959_10114Not AvailableNegative17211 - 1770217706.9
type vi secretion system protein impcSAMN05428959_10115Not AvailableNegative17747 - 1923154669.4
type vi secretion system protein impbSAMN05428959_10116Not AvailableNegative19235 - 1974419213.9
tetratricopeptide repeat-containing proteinSAMN05428959_10117Not AvailableNegative19829 - 2041320581.7
type vi secretion system protein impjSAMN05428959_10118Not AvailablePositive20685 - 2203150071.9
type vi secretion system protein impkSAMN05428959_10119Not AvailablePositive22042 - 2282428505.4
type vi secretion system secreted protein vgrgSAMN05428959_10120Not AvailablePositive22824 - 2554195555.0
16s ribosomal rna . bacterial ssuNot AvailableNot AvailablePositive23498 - 2356418.01
protein of unknown functionSAMN05428959_10121Not AvailablePositive25554 - 2646534111.5

Displaying genes 61 – 70 of 5968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.