Duganella sp. CF517

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF517 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is a feature that can influence its genetic stability and adaptability in various environments. The genomic data for Duganella sp. CF517 is accessible under the accession number FODC00000000.1, providing a resource for further studies on its genetic makeup and potential applications. As a member of the Duganella genus, this bacterium is likely to inhabit diverse ecological niches, potentially participating in biogeochemical cycles. While specific metabolic capabilities of Duganella sp. CF517 are not detailed in the provided traits, members of this genus are generally known for their roles in soil and water ecosystems, where they may contribute to nutrient cycling and organic matter decomposition. Understanding the characteristics of Duganella sp. CF517 can provide insights into its ecological roles and interactions within its environment. Its Gram-negative nature suggests it may possess features such as a thin peptidoglycan layer and an outer membrane, which can influence its resistance to certain antibiotics and its interactions with other microorganisms. The study of Duganella sp. CF517 could thus contribute to broader knowledge regarding microbial diversity, ecosystem function, and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF517
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF517 genome assembly, contig: Ga0115462_130, whole

Gene Summary

Adenine Count

1236343 bp

Thymine Count

1225859 bp

Guanine Count

2286360 bp

Cytosine Count

2312152 bp

Genome Length

7061117 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pep-cterm protein-sorting domain-containing proteinSAMN05428959_101521Not AvailablePositive627161 - 62782623117.5
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05428959_101522Not AvailablePositive627829 - 62857226115.8
hypothetical proteinSAMN05428959_101523Not AvailableNegative628611 - 62915619648.5
beta-lactamase class aSAMN05428959_101524Not AvailableNegative629187 - 63006231206.7
2-polyprenyl-6-methoxyphenol hydroxylaseSAMN05428959_101525Not AvailablePositive630190 - 63179758104.6
uncharacterized conserved protein, duf885 familytSAMN05428959_101526Not AvailablePositive631948 - 63384968723.0
d-amino-acid dehydrogenaseSAMN05428959_101527Not AvailablePositive633858 - 63511745579.8
tetratricopeptide repeat-containing proteinSAMN05428959_101528Not AvailablePositive635167 - 63610230933.1
transcriptional regulator, lysr familySAMN05428959_101529Not AvailableNegative636117 - 63708834895.1
two-component system, narl family, response regulatorSAMN05428959_101530Not AvailablePositive637286 - 63793323456.7

Displaying genes 571 – 580 of 5968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.