Duganella sp. CF517

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF517 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is a feature that can influence its genetic stability and adaptability in various environments. The genomic data for Duganella sp. CF517 is accessible under the accession number FODC00000000.1, providing a resource for further studies on its genetic makeup and potential applications. As a member of the Duganella genus, this bacterium is likely to inhabit diverse ecological niches, potentially participating in biogeochemical cycles. While specific metabolic capabilities of Duganella sp. CF517 are not detailed in the provided traits, members of this genus are generally known for their roles in soil and water ecosystems, where they may contribute to nutrient cycling and organic matter decomposition. Understanding the characteristics of Duganella sp. CF517 can provide insights into its ecological roles and interactions within its environment. Its Gram-negative nature suggests it may possess features such as a thin peptidoglycan layer and an outer membrane, which can influence its resistance to certain antibiotics and its interactions with other microorganisms. The study of Duganella sp. CF517 could thus contribute to broader knowledge regarding microbial diversity, ecosystem function, and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF517
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF517 genome assembly, contig: Ga0115462_130, whole

Gene Summary

Adenine Count

1236343 bp

Thymine Count

1225859 bp

Guanine Count

2286360 bp

Cytosine Count

2312152 bp

Genome Length

7061117 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine phosphatase rsbu, regulator of sigma subunitSAMN05428959_101130Not AvailableNegative167811 - 16903744560.5
2-polyprenyl-6-methoxyphenol hydroxylaseSAMN05428959_101131Not AvailablePositive169348 - 17049940126.9
hypothetical proteinSAMN05428959_101132Not AvailablePositive170594 - 17122322033.5
putative intracellular protease/amidaseSAMN05428959_101133Not AvailableNegative171335 - 17201524070.5
haloacetate dehalogenaseSAMN05428959_101134Not AvailablePositive172363 - 17329234158.5
hypothetical proteinSAMN05428959_101135Not AvailableNegative173333 - 1735307295.78
iron complex outermembrane recepter proteinSAMN05428959_101136Not AvailableNegative173537 - 17559175175.2
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05428959_101137Not AvailableNegative175740 - 17714349439.5
rnd family efflux transporter, mfp subunitSAMN05428959_101138Not AvailableNegative177140 - 17830340019.1
multidrug efflux pump subunit acrbSAMN05428959_101139Not AvailableNegative178293 - 181484111876.0

Displaying genes 181 – 190 of 5968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.