Halomonas aquamarina strain 558

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Vreelandella

Description

Halomonas aquamarina strain 558 is a halophilic bacterium primarily found in marine environments. This strain is characterized by its rod-shaped morphology, which is typical of many members of the Halomonas genus. Halomonas aquamarina strain 558 features a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in saline conditions. The strain is cataloged under the accession number FODB00000000.1, which allows for its identification and retrieval from genetic databases for further study. Its marine habitat suggests that it has evolved mechanisms to thrive in high-salinity environments, a trait that is vital for its survival and proliferation. The ecological significance of Halomonas aquamarina strain 558 lies in its potential role in biogeochemical cycling within marine ecosystems. As a halophilic organism, it may participate in the degradation of organic matter and contribute to nutrient cycling in saline waters. Understanding its metabolic pathways and interactions within its habitat can provide insights into the functioning of marine microbiomes and the adaptations of life in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusVreelandella
SpeciesVreelandella aquamarina
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halomonas aquamarina strain 558 genome assembly, contig:

Gene Summary

Adenine Count

755016 bp

Thymine Count

757100 bp

Guanine Count

997085 bp

Cytosine Count

985399 bp

Genome Length

3497205 bp

Protein-coding Genes

3361 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenosylhomocysteine nucleosidaseSAMN04490369_100123Not AvailableNegative20426 - 2113625115.1
methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+)SAMN04490369_100124Not AvailableNegative21190 - 2205030262.6
Trna-proNot AvailableNot AvailablePositive22261 - 22337Not Available
Trna-argNot AvailableNot AvailablePositive22426 - 22502Not Available
Trna-hisNot AvailableNot AvailablePositive22565 - 22639Not Available
Trna-hisNot AvailableNot AvailablePositive22673 - 22747Not Available
ammonium transporter, amt familySAMN04490369_100129Not AvailableNegative22866 - 26240123351.0
d-amino-acid dehydrogenaseSAMN04490369_100130Not AvailablePositive26577 - 2781845911.4
putative motility proteinSAMN04490369_100131Not AvailablePositive27922 - 281317254.39
bacterial peptide chain release factor 3 (brf-3)SAMN04490369_100132Not AvailablePositive28313 - 2990260151.0

Displaying genes 41 – 50 of 3428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.