Pseudomonas sp. ok266

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. OK266 is characterized by having a single replicon, which can be important for understanding its genomic structure and stability. The genome of this strain is cataloged under the accession number FOCU00000000.1, providing a reference point for researchers interested in its genetic characteristics and potential applications. Pseudomonas species are known for their metabolic diversity and adaptability to various environments, which may contribute to their ecological roles in nutrient cycling and bioremediation. The single replicon in Pseudomonas sp. OK266 could suggest a streamlined genomic organization, potentially influencing its growth and survival strategies in diverse conditions. The ecological significance of Pseudomonas sp. OK266 could be tied to its ability to thrive in various environments, possibly aiding in biodegradation processes or contributing to plant growth promotion. Understanding the genomic features of such strains is essential for leveraging their capabilities in environmental microbiology and biotechnology applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ok266
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ok266
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ok266 genome assembly, contig: Ga0066767_131,

Gene Summary

Adenine Count

1332303 bp

Thymine Count

1349589 bp

Guanine Count

1964300 bp

Cytosine Count

1932395 bp

Genome Length

6581720 bp

Protein-coding Genes

5742 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein 1, paat familySAMN04487856_101405Not AvailableNegative431370 - 43204424681.7
amino acid abc transporter substrate-binding protein, paat familySAMN04487856_101406Not AvailableNegative432066 - 43285127959.9
gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complexSAMN04487856_101407Not AvailablePositive433108 - 43381525267.6
thioredoxinSAMN04487856_101408Not AvailablePositive433936 - 43426511763.2
transcription termination factor rhoSAMN04487856_101410Not AvailablePositive434517 - 43577646929.1
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN04487856_101411Not AvailablePositive435904 - 43786572758.9
3-octaprenyl-4hydroxybenzoate decarboxylaseSAMN04487856_101412Not AvailablePositive437946 - 43941254718.3
cdp-4-dehydro-6-deoxyglucose reductaseSAMN04487856_101413Not AvailablePositive439412 - 44038035710.9
cation transport protein chacSAMN04487856_101414Not AvailablePositive440575 - 44124325101.9
mfs transporter, opa family, glycerol-3-phosphate transporterSAMN04487856_101415Not AvailableNegative441219 - 44256849573.7

Displaying genes 471 – 480 of 5863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.