Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enoyl-coa hydrataseSAMN05192583_0314Not AvailablePositive284443 - 28521627583.3
3-hydroxyisobutyrate dehydrogenaseSAMN05192583_0315Not AvailablePositive285369 - 28627129880.7
l,d-transpeptidase catalytic domainSAMN05192583_0316Not AvailableNegative286377 - 28697920985.8
l,d-transpeptidase catalytic domainSAMN05192583_0317Not AvailablePositive287186 - 28788424628.6
major facilitator superfamily proteinSAMN05192583_0318Not AvailablePositive287956 - 28956056876.0
alanine racemaseSAMN05192583_0319Not AvailablePositive289571 - 29061737111.5
tonb-dependent receptor plug domainSAMN05192583_0320Not AvailableNegative290753 - 293704105666.0
acetyl-coa acetyltransferaseSAMN05192583_0321Not AvailableNegative293887 - 29505940254.2
polyhydroxyalkanoate synthaseSAMN05192583_0322Not AvailableNegative295089 - 29615338060.0
polyhydroxyalkanoate synthesis repressor pharSAMN05192583_0323Not AvailablePositive296168 - 29675220767.8

Displaying genes 351 – 360 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.