Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein rodz, contains xre-like hth and duf4115 domainsSAMN05192583_3407Not AvailableNegative3520140 - 352101529570.1
ptsintr with gaf domain, ptspSAMN05192583_3408Not AvailableNegative3521110 - 352338683649.1
sodium/proton antiporter, cpa1 familySAMN05192583_3409Not AvailablePositive3523465 - 352503055955.9
holliday junction dna helicase subunit ruvbSAMN05192583_3410Not AvailableNegative3525041 - 352609337867.7
polyhydroxybutyrate depolymeraseSAMN05192583_3411Not AvailableNegative3526151 - 352707431834.0
holliday junction dna helicase subunit ruvaSAMN05192583_3412Not AvailableNegative3527144 - 352774320121.3
holliday junction endonuclease ruvcSAMN05192583_3413Not AvailableNegative3527766 - 352827517301.0
dna-binding regulatory protein, yebc/pmpr familySAMN05192583_3414Not AvailableNegative3528298 - 352904126622.1
uncharacterized membrane proteinSAMN05192583_3415Not AvailableNegative3529072 - 352963820314.4
hypothetical proteinSAMN05192583_3416Not AvailablePositive3529754 - 353122052894.4

Displaying genes 3371 – 3380 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.