Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific recombinase xerdSAMN05192583_3244Not AvailablePositive3338368 - 333932435152.5
site-specific recombinase xerdSAMN05192583_3245Not AvailableNegative3339412 - 334053040991.1
pin domain nuclease, a component of toxin-antitoxin system (pin domain)SAMN05192583_3246Not AvailableNegative3340527 - 334090413384.1
looped-hinge helix dna binding domain-containing protein, abrb familySAMN05192583_3247Not AvailableNegative3340909 - 33411579100.0
hypothetical proteinSAMN05192583_3250Not AvailableNegative3342760 - 334355728304.2
nte family proteinSAMN05192583_3251Not AvailableNegative3343561 - 334471541141.0
n-acetylmuramoyl-l-alanine amidaseSAMN05192583_3252Not AvailableNegative3344712 - 334542525147.8
hypothetical proteinSAMN05192583_3253Not AvailableNegative3345437 - 334623127574.1
metallo-beta-lactamase superfamily proteinSAMN05192583_3254Not AvailableNegative3346228 - 334777255376.0
hypothetical proteinSAMN05192583_3255Not AvailableNegative3347776 - 334980074687.5

Displaying genes 3211 – 3220 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.