Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN05192583_3234Not AvailableNegative3327538 - 332836829039.8
arabinose-5-phosphate isomeraseSAMN05192583_3235Not AvailablePositive3328556 - 332955134628.0
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN05192583_3236Not AvailablePositive3329564 - 333037328608.7
probable phosphoglycerate mutaseSAMN05192583_3237Not AvailablePositive3330370 - 333098722450.7
phytanoyl-coa dioxygenase (phyh)SAMN05192583_3238Not AvailablePositive3331026 - 333206938194.3
capsular polysaccharide export proteinSAMN05192583_3239Not AvailablePositive3332074 - 333376260830.5
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN05192583_3240Not AvailableNegative3333759 - 333443025754.4
short-chain dehydrogenaseSAMN05192583_3241Not AvailablePositive3334501 - 333532228460.6
phosphoglycerol transferase mdobSAMN05192583_3242Not AvailableNegative3335332 - 333679852188.8
capsular polysaccharide export proteinSAMN05192583_3243Not AvailablePositive3336985 - 333823846926.4

Displaying genes 3201 – 3210 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.