Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucoamylase (glucan-1,4-alpha-glucosidase), gh15 familySAMN05192583_2890Not AvailablePositive2951087 - 295293167359.0
predicted dehydrogenaseSAMN05192583_2891Not AvailablePositive2952970 - 295410340610.3
pimeloyl-acp methyl ester carboxylesteraseSAMN05192583_2892Not AvailablePositive2954105 - 295485726324.3
hypothetical proteinSAMN05192583_2893Not AvailablePositive2954941 - 29551266676.7
dna-binding transcriptional regulator, lysr familySAMN05192583_2894Not AvailableNegative2955593 - 295648331928.4
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05192583_2895Not AvailablePositive2956656 - 295754933150.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05192583_2896Not AvailablePositive2957562 - 295822722606.8
predicted ester cyclaseSAMN05192583_2897Not AvailablePositive2958239 - 295877819081.2
protein of unknown functionSAMN05192583_2898Not AvailableNegative2958890 - 295935717584.1
ubiquinone/menaquinone biosynthesis c-methylase ubieSAMN05192583_2899Not AvailablePositive2959563 - 296034227955.2

Displaying genes 2861 – 2870 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.