Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
citrate lyase subunit beta / citryl-coa lyaseSAMN05192583_2625Not AvailablePositive2670585 - 267142128787.3
aldose 1-epimeraseSAMN05192583_2626Not AvailableNegative2671406 - 267226331621.1
d-xylose isomeraseSAMN05192583_2627Not AvailableNegative2672293 - 267361548983.4
xylulokinaseSAMN05192583_2628Not AvailableNegative2673615 - 267506650663.3
signal transduction histidine kinaseSAMN05192583_2629Not AvailableNegative2675177 - 267661352871.2
two component transcriptional regulator, winged helix familySAMN05192583_2630Not AvailableNegative2676625 - 267728724310.8
hypothetical proteinSAMN05192583_2631Not AvailableNegative2677339 - 267775815589.2
atp-binding cassette, subfamily f, uupSAMN05192583_2632Not AvailablePositive2677760 - 267954465407.0
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05192583_2633Not AvailablePositive2679643 - 268041027777.6
hypothetical proteinSAMN05192583_2634Not AvailableNegative2680473 - 268130629727.6

Displaying genes 2601 – 2610 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.